Uses of Class
org.simulator.math.odes.MultiTable

Packages that use MultiTable

Package	Description
org.simulator.comp
org.simulator.io	Import and export of files.
org.simulator.math	Classes that contain several mathematical operations.
org.simulator.math.odes	The various solver classes that are all derived from AbstractDESSolver.
org.simulator.plot
org.simulator.sedml	Classes for reading and executing SED-ML files.

Uses of MultiTable in org.simulator.comp

Methods in org.simulator.comp that return MultiTable

Modifier and Type	Method	Description
MultiTable	CompSimulator.solve(double timeEnd, double stepSize)
MultiTable	CompSimulator.solve(double timeEnd, double stepSize, DESSolver solver)

Uses of MultiTable in org.simulator.io

Methods in org.simulator.io that return MultiTable

Modifier and Type	Method	Description
MultiTable	CSVImporter.convert(org.sbml.jsbml.Model model, String pathname)	Function for importing a file and adapting the data to the current model

Uses of MultiTable in org.simulator.math

Methods in org.simulator.math with parameters of type MultiTable

Modifier and Type	Method	Description
double	QualityMeasure.distance(MultiTable x, MultiTable expected)
ArrayList<Double>	QualityMeasure.getColumnDistances(MultiTable x, MultiTable expected)	Computes the distance of two matrices as the sum of the distances of each row.

Uses of MultiTable in org.simulator.math.odes

Methods in org.simulator.math.odes that return MultiTable

Modifier and Type	Method	Description
MultiTable	MultiTable.filter(double[] timepoints)	Creates a multi block table only containing the values for the given timepoints (if available)
protected MultiTable	AbstractDESSolver.initResultMatrix(DESystem DES, double[] initialValues, double[] timePoints)
protected MultiTable	AbstractDESSolver.initResultMatrix(DESystem DES, double[] initialValues, double timeBegin, double timeEnd)
protected MultiTable	AbstractDESSolver.initResultMatrix(DESystem DES, double[] initialValues, double timeBegin, int numSteps)
MultiTable	AbstractDESSolver.solve(DESystem DES, double[] initialValues, double[] timePoints)
MultiTable	AbstractDESSolver.solve(DESystem DES, double[] initialValues, double timeBegin, double timeEnd)
MultiTable	AbstractDESSolver.solve(DESystem DES, double[] initialValues, double x, double h, int steps)
MultiTable	AbstractDESSolver.solve(DESystem DES, MultiTable.Block initConditions, double[] initialValues)
MultiTable	DESSolver.solve(DESystem DES, double[] initialValues, double[] timepoints)	Solves the given differential equation system with the step size h and the number of steps as given starting at the value x.
MultiTable	DESSolver.solve(DESystem DES, double[] initialValues, double timeBegin, double timeEnd)	Solves the given differential equation system
MultiTable	DESSolver.solve(DESystem DES, double[] initialValues, double x, double h, int steps)	Solves the given differential equation system with the step size h and the number of steps as given starting at the value x.
MultiTable	DESSolver.solve(DESystem DES, MultiTable.Block timeSeriesInitConditions, double[] initialValues)	Solves the given DESystem using new initial conditions in each time step.
MultiTable	AbstractDESSolver.steadystate(DESystem DES, double[] initialValues, double maxSteps)

Methods in org.simulator.math.odes with parameters of type MultiTable

Modifier and Type	Method	Description
protected double[]	AbstractDESSolver.additionalResults(DESystem DES, double t, double[] yTemp, MultiTable data, int rowIndex)	Compute additional result values

Uses of MultiTable in org.simulator.plot

Constructors in org.simulator.plot with parameters of type MultiTable

Constructor	Description
PlotMultiTable(MultiTable table)
PlotMultiTable(MultiTable table, String title)	Initializes the JFreeChart and dataSet for the chart using MultiTable

Uses of MultiTable in org.simulator.sedml

Methods in org.simulator.sedml that return MultiTable

Modifier and Type	Method	Description
MultiTable	MultTableSEDMLWrapper.getMultiTable()	Gets the underlying MultiTable wrapped by this class.

Constructors in org.simulator.sedml with parameters of type MultiTable

Constructor	Description
MultTableSEDMLWrapper(MultiTable mTable)