Uses of Package
org.simulator.math.odes

Packages that use org.simulator.math.odes

Package	Description
org.simulator.comp
org.simulator.io	Import and export of files.
org.simulator.math	Classes that contain several mathematical operations.
org.simulator.math.odes	The various solver classes that are all derived from AbstractDESSolver.
org.simulator.plot
org.simulator.sbml	Classes for storing and interpreting an SBML model.
org.simulator.sedml	Classes for reading and executing SED-ML files.

Classes in org.simulator.math.odes used by org.simulator.comp

Class	Description
DESSolver	A DESSolver provides algorithm for the numerical simulation of given DESystems.
MultiTable	This data structure contains the an array of sorted time points and a matrix organized in one column per quantity for which data (measurement or simulation) are gathered.

Classes in org.simulator.math.odes used by org.simulator.io

Class	Description
MultiTable	This data structure contains the an array of sorted time points and a matrix organized in one column per quantity for which data (measurement or simulation) are gathered.

Classes in org.simulator.math.odes used by org.simulator.math

Class	Description
MultiTable	This data structure contains the an array of sorted time points and a matrix organized in one column per quantity for which data (measurement or simulation) are gathered.
MultiTable.Block.Column	A column of the MultiTable.Block matrix.

Classes in org.simulator.math.odes used by org.simulator.math.odes

Class	Description
AbstractDESSolver	This Class represents an abstract solver for event-driven DES
AdamsBashforthSolver	This class is a wrapper for the Adams-Bashforth solver in the Apache Math Library.
AdamsMoultonSolver	This class is a wrapper for the Adams-Moulton solver in the Apache Math Library.
AdaptiveStepsizeIntegrator	This is an abstract class for solvers with adaptive stepsizes and given relative and absolute tolerances.
DelayValueHolder	This interface describes a value holder that can compute values with delay.
DESSolver	A DESSolver provides algorithm for the numerical simulation of given DESystems.
DESystem	A differential equation system describes how to compute the rate of change at a given state of the system.
DormandPrince54Solver	This class is a wrapper for the Dormand-Prince-54 solver in the Apache Math Library.
DormandPrince853Solver	This class is a wrapper for the Dormand-Prince-853 solver in the Apache Math Library.
EulerMethod	In this class the Euler method for integration a differential equation system is implemented.
EventDESystem	This class represents an event-driven differential equation system
EventInProgress	This class represents a compilation of the values and execution times during simulation concerning events.
FastProcessDESystem	This interface describes differential equation systems with fast processes.
FirstOrderSolver	This class is the superclass of the wrapper classes for the solvers of the Apache Math Library.
GraggBulirschStoerSolver	This class is a wrapper for the Gragg-Bulirsch-Stoer solver in the Apache Math Library.
HighamHall54Solver	This class is a wrapper for the Higham-Hall-54 solver in the Apache Math Library.
MultiTable	This data structure contains the an array of sorted time points and a matrix organized in one column per quantity for which data (measurement or simulation) are gathered.
MultiTable.Block	A MultiTable.Block is a data structure with a two-dimensional double array of actual data together with identifiers for each column.
MultiTable.Block.Column	A column of the MultiTable.Block matrix.
RosenbrockSolver	An implementation of Rosenbrock's method to approximate ODE solutions.
RungeKutta_EventSolver	Runge-Kutta method.

Classes in org.simulator.math.odes used by org.simulator.plot

Class	Description
MultiTable	This data structure contains the an array of sorted time points and a matrix organized in one column per quantity for which data (measurement or simulation) are gathered.

Classes in org.simulator.math.odes used by org.simulator.sbml

Class	Description
DelayedDESystem	This interface describes a differential equation system containing values with a delay function.
DelayValueHolder	This interface describes a value holder that can compute values with delay.
DESystem	A differential equation system describes how to compute the rate of change at a given state of the system.
EventDESystem	This class represents an event-driven differential equation system
EventInProgress	This class represents a compilation of the values and execution times during simulation concerning events.
FastProcessDESystem	This interface describes differential equation systems with fast processes.
RichDESystem	A RichDESystem is a DESystem that provides additional information besides the pure rate of change during its evaluation.

Classes in org.simulator.math.odes used by org.simulator.sedml

Class	Description
AbstractDESSolver	This Class represents an abstract solver for event-driven DES
MultiTable	This data structure contains the an array of sorted time points and a matrix organized in one column per quantity for which data (measurement or simulation) are gathered.